Browse of TCMCG002C31932 protein

CDS

Accession Number	TCMCG002C31932
gbkey	CDS
Protein Id	XP_020113868.1
Location	complement(join(3760632..3760698,3761370..3761462,3761577..3761648,3762084..3762157,3762892..3762972,3763411..3763500,3763589..3763759,3765020..3765086,3765220..3765287,3766823..3766921,3767836..3767961,3768471..3768611,3768816..3768902,3768986..3769072,3769891..3770034,3770172..3770268,3770446..3770741,3770853..3770962,3772650..3772722,3773452..3773634,3773976..3774158,3774536..3774716,3775244..3775355,3776243..3776370,3776444..3776530,3777356..3777486))
Gene	LOC109728021
GeneID	109728021
Organism	Ananas comosus

Protein

Length	1015aa
Molecule type	protein
Topology	linear
Data_file_division	PLN
dblink	BioProject:PRJNA371634
db_source	XM_020258279.1
Definition	E3 ubiquitin-protein ligase UPL6 isoform X2 [Ananas comosus]

EGGNOG-MAPPER Annotation

COG_category	O
Description	E3 ubiquitin-protein ligase
KEGG_TC	-
KEGG_Module	-
KEGG_Reaction	-
KEGG_rclass	-
BRITE	ko00000        [VIEW IN KEGG] ko00001        [VIEW IN KEGG] ko01000        [VIEW IN KEGG] ko04121        [VIEW IN KEGG]
KEGG_ko	ko:K10589        [VIEW IN KEGG]
EC	2.3.2.26        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway	ko04120        [VIEW IN KEGG] map04120        [VIEW IN KEGG]
GOs	GO:0003674        [VIEW IN EMBL-EBI] GO:0003824        [VIEW IN EMBL-EBI] GO:0004842        [VIEW IN EMBL-EBI] GO:0005575        [VIEW IN EMBL-EBI] GO:0005622        [VIEW IN EMBL-EBI] GO:0005623        [VIEW IN EMBL-EBI] GO:0005737        [VIEW IN EMBL-EBI] GO:0006464        [VIEW IN EMBL-EBI] GO:0006807        [VIEW IN EMBL-EBI] GO:0008150        [VIEW IN EMBL-EBI] GO:0008152        [VIEW IN EMBL-EBI] GO:0009987        [VIEW IN EMBL-EBI] GO:0016567        [VIEW IN EMBL-EBI] GO:0016740        [VIEW IN EMBL-EBI] GO:0019538        [VIEW IN EMBL-EBI] GO:0019787        [VIEW IN EMBL-EBI] GO:0032446        [VIEW IN EMBL-EBI] GO:0036211        [VIEW IN EMBL-EBI] GO:0043170        [VIEW IN EMBL-EBI] GO:0043412        [VIEW IN EMBL-EBI] GO:0044237        [VIEW IN EMBL-EBI] GO:0044238        [VIEW IN EMBL-EBI] GO:0044260        [VIEW IN EMBL-EBI] GO:0044267        [VIEW IN EMBL-EBI] GO:0044424        [VIEW IN EMBL-EBI] GO:0044464        [VIEW IN EMBL-EBI] GO:0061630        [VIEW IN EMBL-EBI] GO:0061659        [VIEW IN EMBL-EBI] GO:0070647        [VIEW IN EMBL-EBI] GO:0071704        [VIEW IN EMBL-EBI] GO:0140096        [VIEW IN EMBL-EBI] GO:1901564        [VIEW IN EMBL-EBI]

Sequence

CDS:   ATGGCGACGCGTCGGCGCGGCGGCGCGTGGACCTCGGCGGCCGGAGCTCGAAGGAGCGGGACCGGCAGATGCTGCTGGAGCAGCGGCGGCTGGGGCTCAAGCAGCAGACCTCGGCCGCCATTAAGATTCAGAGGGAGGAAGGTTGTTGAAATAGCACGATTTAATGTGCGGCAGCAGTTTTTTCTTACTTTTGGGGATCAGTGCCAACGAGTAGATTTGAATTGCTTTCGCCCCAATTCAGAGTTTCTTCGCCAATTGCTCTTCTTCTTTAATGGGAAGAACGGCAATGATGTTTCTATCCTTTTAGAGGCATGCAAATTGCTTTTACAGTATGTTTGGCATAATGGAGATATTGTAAGCCTTTTTGCTGGTGAAGATTACTCCTTGAAAAGATCTTTTGTAGAGCATAGGATAAAAAAACTTGCATATATTTGTGTACAAGCAGTCTATCAGAATAGGAATCAGTGGAAGAATCAACTTTTGATGCCATCCAAGAATTCCAGTATGCCTGCAGTCATTCTACTAGAAACTTTGGCATGCTTAATAAATCCTGAACTTCCGTGGGTCTGTGAAGTTGTGGGTTATCTGCAGCAAAAAAATGTTTTTTCTTTGTTACGTGGCATAGTTCTTGCTGGCTTGAAAAATGTGAGTGCTCCGGAGCCTGATGGTAGCTTATCTTCCTTGGAGCATGTTGTAGCCCTTGTTGCTTCACATATTAGTCACCAGCCAAGTTATTGTTCAACAGTAGATCCCAAGTGGAGTTTCTTCTCACAATTTCTTTCCATTCCTTTTATGTGGCATCACCTGCCATACTTCAAGGAGATTTTCTCAGTAAAGGGACTTGGCAAACATTATGTTCATCAGACGGCATTATGTTTGCCAAGTAATCACAATGTCCTTCCCAGTGATGTATCGCCGGAATATCCAGGCTATGCCTGCATACTTGGAAATTTACTTGAAGCTGCCGCTTTTGTTTTGTCTGATCCAAAACTTGCTTCTGATACAGCTCTAGACTTTATTACTGTTTCGACATTCTTGTTGGACACATTGCCAACAGTGACATCATCAGCAAAACAATACCCAGCTGAGGATGATGAATTCATGGACGAGGGGGTTAAAAGCTCTCTTGCTGTCGACTTAGAAAGGCAGATATGCAATGCAATAGACTCGCGTCTTTTGCAACATTTGGTGAATCTTCTATTTCAAGGCACATTATCCACTAGCTATAGTGGACCGTCTGATGAAGAGGTGGAAGCTGTAGGATCAATTTGCACTTTCCTACACGTGGTATTCAGTACATTGCCTCCCGAGCTCATCATGACTGGACTAGCTTACCGGACTGAGCTTGTTCCCGCCCTTTGGAATTTCATTAAGAAATGCCATGAGAATCAAAGATGGCCATTCTGTTCCAAGCTCATGACGAATTTACCCAGCGATGCTCCAAATTGGCTGTTGCCTCTGTCTGTCTTTTCTCCTGTATATAAGCATATCTTGATGATTGTTGATAATGAAGAGTTCTATGAGCAGGAGAAACCACTTTCATTAAATGATATTAGGTCCTTAGTTATCATTCTAAAGCAGGCCCTATGGCAACTTCTATGGACAATTCCTGCACATAACCCTTCGACTCAGAAAGCATCGACCATCCCTTCGAGGATTAAGAAACTTTCGGTGGAAAATATCAAAAGCAGAGCTAGGATTGTTATGTCTGAACTTCTGGCACAGTTGCAAGACTGGAACAACAGAAGGTCATTCACATCCGCCAGTGACTTCTATTCTCAAGAAGCAACGAATGAAAACTTCATCTCACAGGCAATACTTGGAAACACTCGGGCATCTGATATATTAAAACTCGCTCCCTTTCTTGTGCCGTTTACTAGCAGAGTCAGAATATTCACTTCACAGTTGGCTGCTTCTAAACAAAGAACTGGATCCCATCCCATATTAACAAGGCACCGTTTCAAAATAAGAAGAAATCGGATTGTTGAAGATGCTTTCAACTCCCTGAGCGGATTGTCAGAGGAAGATCTTCGAGCATCAATCCGTGTATCTTTTGTTAATGAACTGGGAGTAGAGGAGGTTGGAATTGATGGGGGTGGAATCTTCAAAGATTTTATGGAGAACATTATTCAAGCTGCTTTTGATGTACAGTACGGGCTTTTTAAGGAAACAGCCGATCATCTTTTGTATCCAAACCCTGGATCAGGATTAACTCATGAACAACATCTACAACTTTTCCATTTTCTTGGAACCCTCCTTGGAAAGGCAATGTATGAAGGAATACTTGTTGATATTCCATTTGCAACATTCTTCCTAAGCAAATTGAAAGAAAAACACAACTATTTGCATGACTTGCCTTCGTTAGACCCAGAGTTGTATCGGCATCTGCTATTTTTGAAGCACTATCAAGGTGATATTTCGGAACTAGAACTGTATTTTGTTATTGTAAACAATGAGTATGGAGAACAAACAGAAGAGGAACTAGTACCTGGTGGGAGAGATTTGCGTGTTACCAATGAAAATGTTATTACCTTTATTCATCTCATCTCCAATCATCGTTTGAACTATCAGATCCGCCATCAAAGTTTACATTTCTTGCGAGGATTTCAACAACTTATCGAGAAAGAATGGATTGATATGTTCAATGAGAATGAACTTCAGCTTCTTATATCTGGTTCACTGGAAAGCATGGACGTTGATGACCTTCGCTCCAATACTAAATATGCCGGCGGCTATCATCCAGATCACCATGTTATTGAGATGTTCTGGGAGGTTGTTAAGAGCTTCTCTCTGGAGCACCAGAAGAAATTTTTAAAGTTTGTAACCGGATGCTCTCGAGGACCTCTTCTCGGTTTCAAGTATATCGAACCGAATTTCTGCATACAGAGGGCTGGTTCTTTTGATGCCGCAGAAGAGGATCTCGACCGTCTTCCCACTTCAGCAACTTGCATGAACCTACTTAAGCTCCCGCCCTACAGAAGTAAGGAGCAGCTGCGGACCAAATTGCTGTATGCGATAAACGCAGAAGCTGGTTTCGACCTAAGTTAA

Protein:   MATRRRGGAWTSAAGARRSGTGRCCWSSGGWGSSSRPRPPLRFRGRKVVEIARFNVRQQFFLTFGDQCQRVDLNCFRPNSEFLRQLLFFFNGKNGNDVSILLEACKLLLQYVWHNGDIVSLFAGEDYSLKRSFVEHRIKKLAYICVQAVYQNRNQWKNQLLMPSKNSSMPAVILLETLACLINPELPWVCEVVGYLQQKNVFSLLRGIVLAGLKNVSAPEPDGSLSSLEHVVALVASHISHQPSYCSTVDPKWSFFSQFLSIPFMWHHLPYFKEIFSVKGLGKHYVHQTALCLPSNHNVLPSDVSPEYPGYACILGNLLEAAAFVLSDPKLASDTALDFITVSTFLLDTLPTVTSSAKQYPAEDDEFMDEGVKSSLAVDLERQICNAIDSRLLQHLVNLLFQGTLSTSYSGPSDEEVEAVGSICTFLHVVFSTLPPELIMTGLAYRTELVPALWNFIKKCHENQRWPFCSKLMTNLPSDAPNWLLPLSVFSPVYKHILMIVDNEEFYEQEKPLSLNDIRSLVIILKQALWQLLWTIPAHNPSTQKASTIPSRIKKLSVENIKSRARIVMSELLAQLQDWNNRRSFTSASDFYSQEATNENFISQAILGNTRASDILKLAPFLVPFTSRVRIFTSQLAASKQRTGSHPILTRHRFKIRRNRIVEDAFNSLSGLSEEDLRASIRVSFVNELGVEEVGIDGGGIFKDFMENIIQAAFDVQYGLFKETADHLLYPNPGSGLTHEQHLQLFHFLGTLLGKAMYEGILVDIPFATFFLSKLKEKHNYLHDLPSLDPELYRHLLFLKHYQGDISELELYFVIVNNEYGEQTEEELVPGGRDLRVTNENVITFIHLISNHRLNYQIRHQSLHFLRGFQQLIEKEWIDMFNENELQLLISGSLESMDVDDLRSNTKYAGGYHPDHHVIEMFWEVVKSFSLEHQKKFLKFVTGCSRGPLLGFKYIEPNFCIQRAGSFDAAEEDLDRLPTSATCMNLLKLPPYRSKEQLRTKLLYAINAEAGFDLS